You can deploy your application as an exploded war i.e., create a yourwebapp.war directory under the deploy directory and copy all the files under it.
then how about the other .jar file.........??? Seem I ear all jar into a application.ear and all JSP in a application.war folder but cannot work?
create a WEB-INF\lib under your yourwebapp.war directory and add all the dependent jars under it.
yourwebapp.war ---- WEB-INF --------lib <copy your jars here>