Have you checked your JAWS options like Create-table, remove-table, tuned-updates?
are you sure you are well-linked to your db, i.e. you can create entity bean and in the same time and the record to your db?
are you still having this problem? i am seeing kind of the same thing. i use the "remove" method of an entity bean's home interface to remove the bean. when i look at the actual record, the record is still there. the primary key (in my case, an Integer) is still set to the
original key value but all the fields are NULLed out. i am using MySQL also.